Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 GLUD1P2-201ENST00000583339 201 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 GLUD1P8-201ENST00000585063 203 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC099667.1-201ENST00000624222 469 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 NOX1-203ENST00000372964 661 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RNA5SP155-201ENST00000411154 129 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 VN1R66P-201ENST00000412929 916 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC115283.1-201ENST00000427353 400 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RHEBP1-201ENST00000448647 556 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 PSPC1P2-201ENST00000455130 225 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC066616.1-201ENST00000486795 413 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RN7SL214P-201ENST00000487317 265 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC122718.2-201ENST00000505325 591 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 MIR6503-201ENST00000622884 86 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL590004.4-201ENST00000566733 7060 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL035555.1-201ENST00000404462 1790 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL596268.1-201ENST00000427910 1048 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 HBG2-204ENST00000444587 307 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RPS14P7-201ENST00000473701 448 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RN7SL654P-201ENST00000479178 292 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC113367.2-201ENST00000505749 160 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC024451.1-201ENST00000508013 779 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC010287.1-201ENST00000566916 357 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RPL7AP69-201ENST00000595306 806 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC137695.2-201ENST00000603123 754 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL135999.3-201ENST00000610501 812 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 IGKV2OR2-10-201ENST00000613976 311 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ASNSP6-201ENST00000592770 1618 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 PPIAP24-201ENST00000328558 471 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RNA5SP110-201ENST00000362638 115 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RN7SKP189-201ENST00000365042 330 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RPL7L1P11-201ENST00000446092 721 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RN7SL37P-201ENST00000490461 307 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 SAA3P-201ENST00000533267 365 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC093283.1-201ENST00000565306 1075 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 WBP1LP12-201ENST00000604449 331 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC119674.1-201ENST00000641611 1210 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 RNA5SP435-201ENST00000364044 108 ntBASIC2.07□□□□□ -2.08
SYNE1Q8NF91 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE1Q8NF91 COL11A2P1-205ENST00000441798 676 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms