Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC091193.1-201ENST00000604640 448 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AL035410.2-201ENST00000604963 864 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC097634.1-201ENST00000604491 2467 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC009120.2-204ENST00000621548 2032 ntBASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CCDC50Q8IVM0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC096992.2-201ENST00000609553 1684 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AL512329.1-201ENST00000404600 1592 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 PARP4P1-201ENST00000435945 2337 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 RNA5SP114-201ENST00000363780 113 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 RNU12-2P-201ENST00000364789 156 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 RNA5SP251-201ENST00000410614 137 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 RPL12P10-201ENST00000413498 498 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AL645936.2-201ENST00000430565 928 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 NMNAT1P3-201ENST00000457517 888 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 RN7SL216P-201ENST00000471607 298 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC117395.1-201ENST00000487390 403 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC004232.1-201ENST00000571388 208 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC011497.2-201ENST00000600255 639 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AL035417.2-201ENST00000603887 796 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC012510.1-201ENST00000607946 759 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC008626.2-201ENST00000624425 248 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AL359263.1-201ENST00000441188 2796 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC005225.5-201ENST00000623547 2225 ntBASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC50Q8IVM0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.09□□□□□ -1.28
CCDC50Q8IVM0 AC093297.3-201ENST00000607056 2517 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AC013488.1-201ENST00000526618 1838 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AL353803.3-201ENST00000444641 335 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 GOT2P2-201ENST00000450663 1251 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 PCMTD1P3-201ENST00000451824 472 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 MEF2AP1-201ENST00000454867 863 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 RPL23AP80-201ENST00000495605 424 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 TECRP2-201ENST00000503270 928 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 DCAF13P2-201ENST00000514188 555 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 IGLC4-201ENST00000517690 248 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AP001646.2-201ENST00000528645 1156 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 OR4A13P-201ENST00000529316 942 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms