Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 MTND5P12-201ENST00000502851 1449 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 EEF1A1P2-201ENST00000553854 1447 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 OR56A1-201ENST00000316650 1071 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 RNU6-116P-201ENST00000384042 109 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 TDGF1P4-201ENST00000401555 520 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 OR51A5P-201ENST00000415429 942 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 ATP5HP2-201ENST00000433885 485 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 NANOGP2-201ENST00000435391 727 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC007790.1-201ENST00000439081 782 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 MARK2P14-201ENST00000449657 628 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 RPL5P29-201ENST00000482972 894 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC109458.1-201ENST00000508858 316 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 HSD3BP4-201ENST00000511509 1120 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC138356.2-201ENST00000521192 667 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 IGKV2D-14-201ENST00000522473 355 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 MTCO3P13-201ENST00000577757 781 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 RN7SL664P-201ENST00000584239 305 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 EIF4A2P1-201ENST00000587313 1063 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AL158151.4-201ENST00000600965 507 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 C8orf59P2-201ENST00000603441 271 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC106791.2-201ENST00000604680 391 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC064836.2-201ENST00000609491 462 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC100793.4-201ENST00000613683 429 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC007671.1-201ENST00000616957 830 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC048380.3-201ENST00000623145 796 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 FP325313.1-201ENST00000638228 703 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC241584.2-201ENST00000637142 2090 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC090229.1-201ENST00000590983 1609 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 MAPK10-365ENST00000641902 3825 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC133552.3-201ENST00000572236 1869 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 RNU6-114P-201ENST00000384704 105 ntBASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 AC008171.1-201ENST00000395058 200 ntBASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 RSL24D1P4-201ENST00000400938 484 ntBASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 ARL4AP5-201ENST00000404372 599 ntBASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.31□□□□□ -1.08
FOXR1Q6PIV2 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms