Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ACTG1P15-201ENST00000570019 1063 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC092032.1-201ENST00000603090 165 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AL008582.1-201ENST00000609612 442 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AC010998.3-201ENST00000613871 631 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AL161420.1-201ENST00000619393 264 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AC073862.4-201ENST00000622982 854 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC104837.1-201ENST00000444644 1587 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CX3CL1P78423 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 AL033543.1-201ENST00000623440 13454 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 OR5M2P-202ENST00000641241 4242 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CX3CL1P78423 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 ABCA11P-202ENST00000504019 2110 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 AC020978.6-201ENST00000571197 3177 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CX3CL1P78423 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CX3CL1P78423 RNA5SP53-201ENST00000391299 120 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 ELOBP4-201ENST00000423418 296 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 FDPSP6-201ENST00000425091 512 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 CHCHD3P1-201ENST00000425516 676 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 LSM3P3-201ENST00000436601 306 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC005517.1-201ENST00000452091 489 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 MTND2P3-201ENST00000452458 470 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 GAPDHP53-201ENST00000458397 924 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 RPS4XP19-201ENST00000460237 736 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 AC135721.2-201ENST00000464237 300 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 RPL34P34-201ENST00000465389 354 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 RPL5P12-201ENST00000477071 851 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 AC026826.1-201ENST00000493002 361 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 RN7SL776P-201ENST00000493390 268 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AP001646.2-201ENST00000528645 1156 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC011611.6-201ENST00000547483 255 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 NF1P12-201ENST00000549593 583 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.56□□□□□ -1.52
CX3CL1P78423 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC122710.3-201ENST00000606566 541 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 RN7SL126P-201ENST00000616400 299 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AC011471.4-201ENST00000638271 216 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CL1P78423 AL513548.1-201ENST00000562904 1724 ntBASIC5.56□□□□□ -1.52
CX3CL1P78423 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CL1P78423 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CL1P78423 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CX3CL1P78423 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms