Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CCNA1P78396 ENO1P4-201ENST00000416471 1785 ntBASIC7.71□□□□□ -1.18
CCNA1P78396 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.71□□□□□ -1.18
CCNA1P78396 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCNA1P78396 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.71□□□□□ -1.18
CCNA1P78396 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.71□□□□□ -1.18
CCNA1P78396 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCNA1P78396 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.7□□□□□ -1.18
CCNA1P78396 IFIT1P1-201ENST00000400497 1449 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.7□□□□□ -1.18
CCNA1P78396 AC007938.1-201ENST00000562524 2902 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.7□□□□□ -1.18
CCNA1P78396 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 RNA5SP433-201ENST00000364491 114 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 MRPS6P2-201ENST00000381143 370 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 OR7E156P-201ENST00000400303 464 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.7□□□□□ -1.18
CCNA1P78396 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.7□□□□□ -1.18
CCNA1P78396 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.7□□□□□ -1.18
CCNA1P78396 AL389925.1-201ENST00000432257 728 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.7□□□□□ -1.18
CCNA1P78396 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.7□□□□□ -1.18
CCNA1P78396 AP002884.1-201ENST00000479691 655 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.7□□□□□ -1.18
CCNA1P78396 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.7□□□□□ -1.18
CCNA1P78396 RPS4XP23-201ENST00000487801 237 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 OR4A21P-201ENST00000532759 944 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.7□□□□□ -1.18
CCNA1P78396 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.7□□□□□ -1.18
CCNA1P78396 AC026956.1-201ENST00000558741 396 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.7□□□□□ -1.18
CCNA1P78396 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.7□□□□□ -1.18
CCNA1P78396 SMIM12P1-201ENST00000603004 274 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.7□□□□□ -1.18
CCNA1P78396 AL121583.1-201ENST00000612444 682 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.7□□□□□ -1.18
CCNA1P78396 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 PSMC1P6-201ENST00000477233 1319 ntBASIC7.7□□□□□ -1.18
CCNA1P78396 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.7□□□□□ -1.18
CCNA1P78396 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCNA1P78396 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.69□□□□□ -1.18
CCNA1P78396 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 API5P1-201ENST00000424316 1510 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.69□□□□□ -1.18
CCNA1P78396 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 RNA5SP77-201ENST00000365394 120 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.69□□□□□ -1.18
CCNA1P78396 AL929472.1-201ENST00000417484 429 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 FABP5P1-201ENST00000423401 411 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.69□□□□□ -1.18
CCNA1P78396 GAPDHP59-201ENST00000435908 267 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 GAPDHP33-201ENST00000443168 1013 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 AL020997.1-201ENST00000446554 349 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 RPS14P8-201ENST00000478778 369 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.69□□□□□ -1.18
CCNA1P78396 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.69□□□□□ -1.18
CCNA1P78396 AC021220.1-201ENST00000507445 630 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.69□□□□□ -1.18
CCNA1P78396 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 RNA5SP441-201ENST00000516809 88 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.69□□□□□ -1.18
CCNA1P78396 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.69□□□□□ -1.18
CCNA1P78396 AC245052.7-201ENST00000601161 359 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 SNORD96A-201ENST00000606577 79 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 AC130456.6-201ENST00000623745 765 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.69□□□□□ -1.18
CCNA1P78396 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.69□□□□□ -1.18
CCNA1P78396 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.69□□□□□ -1.18
CCNA1P78396 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CCNA1P78396 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCNA1P78396 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.69□□□□□ -1.18
CCNA1P78396 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.68□□□□□ -1.18
CCNA1P78396 QRSL1P1-201ENST00000400977 1540 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms