Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.04□□□□□ -1.28
PTPN9P43378 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.04□□□□□ -1.28
PTPN9P43378 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN9P43378 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC7.04□□□□□ -1.28
PTPN9P43378 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN9P43378 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN9P43378 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN9P43378 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PTPN9P43378 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN9P43378 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN9P43378 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.04□□□□□ -1.28
PTPN9P43378 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN9P43378 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN9P43378 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.04□□□□□ -1.28
PTPN9P43378 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PTPN9P43378 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.03□□□□□ -1.28
PTPN9P43378 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
PTPN9P43378 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.03□□□□□ -1.28
PTPN9P43378 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
PTPN9P43378 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.03□□□□□ -1.28
PTPN9P43378 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PTPN9P43378 UBBP1-201ENST00000392399 473 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 AC240504.1-201ENST00000395709 845 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC7.03□□□□□ -1.28
PTPN9P43378 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.03□□□□□ -1.28
PTPN9P43378 AC092646.1-201ENST00000427142 901 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.03□□□□□ -1.28
PTPN9P43378 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.03□□□□□ -1.28
PTPN9P43378 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.03□□□□□ -1.28
PTPN9P43378 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.03□□□□□ -1.28
PTPN9P43378 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 MIR5095-201ENST00000578844 88 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.03□□□□□ -1.28
PTPN9P43378 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.03□□□□□ -1.28
PTPN9P43378 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 AC006328.2-201ENST00000623198 397 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 AC012005.2-201ENST00000624333 397 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PTPN9P43378 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.03□□□□□ -1.28
PTPN9P43378 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PTPN9P43378 FO082842.1-201ENST00000423552 1370 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 AL596244.1-201ENST00000567068 3779 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PTPN9P43378 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.03□□□□□ -1.28
PTPN9P43378 AC092701.1-201ENST00000623627 1551 ntBASIC7.03□□□□□ -1.28
PTPN9P43378 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN9P43378 ZNF658B-201ENST00000602828 3408 ntBASIC7.02□□□□□ -1.28
PTPN9P43378 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
PTPN9P43378 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.02□□□□□ -1.28
PTPN9P43378 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.02□□□□□ -1.28
PTPN9P43378 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PTPN9P43378 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
PTPN9P43378 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.02□□□□□ -1.29
PTPN9P43378 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.02□□□□□ -1.29
PTPN9P43378 AP000641.1-201ENST00000531988 1639 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PTPN9P43378 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
PTPN9P43378 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
PTPN9P43378 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
PTPN9P43378 MAPK10-357ENST00000641831 2858 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
PTPN9P43378 RNU6-167P-201ENST00000384292 106 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
PTPN9P43378 RPS21P8-201ENST00000413365 247 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PTPN9P43378 MEAF6P1-201ENST00000416092 327 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 AC000089.1-201ENST00000424559 801 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 RPL3P11-201ENST00000434028 1146 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PTPN9P43378 PMS2P9-201ENST00000441237 515 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 GAPDHP20-201ENST00000444107 1007 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 PFN1P11-201ENST00000445829 389 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.02□□□□□ -1.29
PTPN9P43378 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.02□□□□□ -1.29
PTPN9P43378 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PTPN9P43378 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.02□□□□□ -1.29
PTPN9P43378 SULT1D1P-201ENST00000458020 882 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 RPL5P16-201ENST00000471467 790 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC7.02□□□□□ -1.29
PTPN9P43378 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.02□□□□□ -1.29
PTPN9P43378 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 AC091849.1-201ENST00000509920 121 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 AC093878.1-201ENST00000515630 432 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 IGKV2D-38-201ENST00000518423 240 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 AC008676.3-201ENST00000521237 435 ntBASIC7.02□□□□□ -1.29
PTPN9P43378 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms