Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 AC009413.1-201ENST00000414823 399 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.75□□□□□ -1.33
MSX2P35548 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC6.75□□□□□ -1.33
MSX2P35548 FDPSP1-201ENST00000424976 1071 ntBASIC6.75□□□□□ -1.33
MSX2P35548 SNX18P14-201ENST00000429308 574 ntBASIC6.75□□□□□ -1.33
MSX2P35548 MTND5P25-201ENST00000430499 799 ntBASIC6.75□□□□□ -1.33
MSX2P35548 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MSX2P35548 ELOCP11-201ENST00000436690 332 ntBASIC6.75□□□□□ -1.33
MSX2P35548 ELOCP16-201ENST00000444494 332 ntBASIC6.75□□□□□ -1.33
MSX2P35548 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC6.75□□□□□ -1.33
MSX2P35548 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC6.75□□□□□ -1.33
MSX2P35548 AC135721.2-201ENST00000464237 300 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC104164.3-201ENST00000467363 1258 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MSX2P35548 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC6.75□□□□□ -1.33
MSX2P35548 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.75□□□□□ -1.33
MSX2P35548 AC117522.2-201ENST00000510049 657 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.75□□□□□ -1.33
MSX2P35548 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC6.75□□□□□ -1.33
MSX2P35548 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.75□□□□□ -1.33
MSX2P35548 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC6.75□□□□□ -1.33
MSX2P35548 OR4A13P-201ENST00000529316 942 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.75□□□□□ -1.33
MSX2P35548 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.75□□□□□ -1.33
MSX2P35548 AC084824.2-201ENST00000548906 345 ntBASIC6.75□□□□□ -1.33
MSX2P35548 MTND2P17-201ENST00000550281 688 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.75□□□□□ -1.33
MSX2P35548 AC005632.2-201ENST00000564271 828 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC023827.2-201ENST00000566880 1061 ntBASIC6.75□□□□□ -1.33
MSX2P35548 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 MIR5095-201ENST00000578844 88 ntBASIC6.75□□□□□ -1.33
MSX2P35548 APOC2-204ENST00000591597 447 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 AL021918.1-201ENST00000603933 236 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC104184.1-201ENST00000607513 721 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC016394.1-201ENST00000608444 833 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC122108.2-201ENST00000611946 526 ntBASIC6.75□□□□□ -1.33
MSX2P35548 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
MSX2P35548 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 ELMO2P1-202ENST00000614283 794 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC018926.1-201ENST00000616335 435 ntBASIC6.75□□□□□ -1.33
MSX2P35548 AC126544.2-201ENST00000625174 749 ntBASIC6.75□□□□□ -1.33
MSX2P35548 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 HCCAT5-202ENST00000642127 1029 ntBASIC6.75□□□□□ -1.33
MSX2P35548 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.75□□□□□ -1.33
MSX2P35548 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.75□□□□□ -1.33
MSX2P35548 WBP11P1-201ENST00000562560 1931 ntBASIC6.75□□□□□ -1.33
MSX2P35548 ZNF658B-201ENST00000602828 3408 ntBASIC6.75□□□□□ -1.33
MSX2P35548 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MSX2P35548 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.75□□□□□ -1.33
MSX2P35548 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MSX2P35548 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.75□□□□□ -1.33
MSX2P35548 AC034229.2-201ENST00000566945 2508 ntBASIC6.75□□□□□ -1.33
MSX2P35548 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MSX2P35548 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
MSX2P35548 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MSX2P35548 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
MSX2P35548 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
MSX2P35548 TPTE2P2-201ENST00000403471 1466 ntBASIC6.74□□□□□ -1.33
MSX2P35548 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.74□□□□□ -1.33
MSX2P35548 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.74□□□□□ -1.33
MSX2P35548 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.74□□□□□ -1.33
MSX2P35548 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 RN7SKP36-201ENST00000363997 312 ntBASIC6.74□□□□□ -1.33
MSX2P35548 SNORD116-2-201ENST00000384274 95 ntBASIC6.74□□□□□ -1.33
MSX2P35548 SNORD116-6-201ENST00000384711 96 ntBASIC6.74□□□□□ -1.33
MSX2P35548 TAS2R15P-201ENST00000390674 928 ntBASIC6.74□□□□□ -1.33
MSX2P35548 AC092952.1-201ENST00000397646 1209 ntBASIC6.74□□□□□ -1.33
MSX2P35548 VN1R51P-201ENST00000411675 945 ntBASIC6.74□□□□□ -1.33
MSX2P35548 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC6.74□□□□□ -1.33
MSX2P35548 CRIP1P3-201ENST00000416794 220 ntBASIC6.74□□□□□ -1.33
MSX2P35548 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.74□□□□□ -1.33
MSX2P35548 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC6.74□□□□□ -1.33
MSX2P35548 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 RBMY2YP-201ENST00000423333 912 ntBASIC6.74□□□□□ -1.33
MSX2P35548 RPL19P21-201ENST00000424919 591 ntBASIC6.74□□□□□ -1.33
MSX2P35548 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.74□□□□□ -1.33
MSX2P35548 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.74□□□□□ -1.33
MSX2P35548 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.74□□□□□ -1.33
MSX2P35548 NPM1P48-201ENST00000436002 853 ntBASIC6.74□□□□□ -1.33
MSX2P35548 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.74□□□□□ -1.33
MSX2P35548 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.74□□□□□ -1.33
MSX2P35548 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 OR7E62P-201ENST00000456741 477 ntBASIC6.74□□□□□ -1.33
MSX2P35548 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC6.74□□□□□ -1.33
MSX2P35548 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.74□□□□□ -1.33
MSX2P35548 AC026826.1-201ENST00000493002 361 ntBASIC6.74□□□□□ -1.33
MSX2P35548 AL031073.1-201ENST00000503029 1139 ntBASIC6.74□□□□□ -1.33
MSX2P35548 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MSX2P35548 AC021146.11-201ENST00000503319 491 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms