Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FRG2MP-201ENST00000613317 856 ntBASIC6.48□□□□□ -1.37
CD40P25942 pRNA.9-201ENST00000618609 89 ntBASIC6.48□□□□□ -1.37
CD40P25942 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 AC092159.4-201ENST00000624944 550 ntBASIC6.48□□□□□ -1.37
CD40P25942 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 SNORA43.5-201ENST00000631270 138 ntBASIC6.48□□□□□ -1.37
CD40P25942 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 LINC00663-203ENST00000586885 2546 ntBASIC6.48□□□□□ -1.37
CD40P25942 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.48□□□□□ -1.37
CD40P25942 NEK2P4-201ENST00000425793 1329 ntBASIC6.48□□□□□ -1.37
CD40P25942 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.48□□□□□ -1.37
CD40P25942 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC6.48□□□□□ -1.37
CD40P25942 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CD40P25942 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC6.48□□□□□ -1.37
CD40P25942 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.47□□□□□ -1.37
CD40P25942 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 CD46-209ENST00000367047 3089 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CD40P25942 AL121835.2-201ENST00000624253 3502 ntBASIC6.47□□□□□ -1.37
CD40P25942 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
CD40P25942 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 RPL10P16-201ENST00000325000 645 ntBASIC6.47□□□□□ -1.37
CD40P25942 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 RNU4-28P-201ENST00000364739 141 ntBASIC6.47□□□□□ -1.37
CD40P25942 NXT2-204ENST00000372107 937 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 ARMCX7P-201ENST00000372828 562 ntBASIC6.47□□□□□ -1.37
CD40P25942 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 LRRC37BP1-201ENST00000398851 714 ntBASIC6.47□□□□□ -1.37
CD40P25942 RNA5SP231-201ENST00000410496 138 ntBASIC6.47□□□□□ -1.37
CD40P25942 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 MTCO3P4-201ENST00000419236 787 ntBASIC6.47□□□□□ -1.37
CD40P25942 FTOP1-201ENST00000419363 861 ntBASIC6.47□□□□□ -1.37
CD40P25942 EIF4A1P1-201ENST00000420241 934 ntBASIC6.47□□□□□ -1.37
CD40P25942 AC006065.1-201ENST00000422539 802 ntBASIC6.47□□□□□ -1.37
CD40P25942 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 AC244505.2-201ENST00000435089 759 ntBASIC6.47□□□□□ -1.37
CD40P25942 AL954705.1-201ENST00000435277 559 ntBASIC6.47□□□□□ -1.37
CD40P25942 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 SNRPFP2-201ENST00000440710 251 ntBASIC6.47□□□□□ -1.37
CD40P25942 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 SETD6P1-201ENST00000444575 317 ntBASIC6.47□□□□□ -1.37
CD40P25942 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 LIN28AP2-201ENST00000445283 458 ntBASIC6.47□□□□□ -1.37
CD40P25942 YWHABP1-201ENST00000445359 727 ntBASIC6.47□□□□□ -1.37
CD40P25942 AL157827.1-201ENST00000447622 132 ntBASIC6.47□□□□□ -1.37
CD40P25942 ZNF886P-201ENST00000450781 723 ntBASIC6.47□□□□□ -1.37
CD40P25942 AC092570.2-201ENST00000452117 1143 ntBASIC6.47□□□□□ -1.37
CD40P25942 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 AC004890.1-201ENST00000461005 181 ntBASIC6.47□□□□□ -1.37
CD40P25942 RN7SL688P-201ENST00000471754 275 ntBASIC6.47□□□□□ -1.37
CD40P25942 AC015820.1-201ENST00000473882 321 ntBASIC6.47□□□□□ -1.37
CD40P25942 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 AP000563.1-201ENST00000490865 758 ntBASIC6.47□□□□□ -1.37
CD40P25942 RPL21P131-201ENST00000497298 483 ntBASIC6.47□□□□□ -1.37
CD40P25942 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.47□□□□□ -1.37
CD40P25942 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.47□□□□□ -1.37
CD40P25942 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.47□□□□□ -1.37
CD40P25942 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.47□□□□□ -1.37
CD40P25942 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 AC011611.6-201ENST00000547483 255 ntBASIC6.47□□□□□ -1.37
CD40P25942 AL049830.4-201ENST00000555149 351 ntBASIC6.47□□□□□ -1.37
CD40P25942 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms