Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
DKK3Q9UBP4 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 YWHAZP5-201ENST00000419975 730 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 GSTA6P-201ENST00000424144 582 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 CHCHD4P5-201ENST00000436684 427 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 SDHCP3-201ENST00000445371 506 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AL354714.5-201ENST00000450131 590 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 FCF1P7-201ENST00000451185 558 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 ST13P21-201ENST00000453250 1098 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 TPRKBP1-201ENST00000456243 481 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 RN7SL868P-201ENST00000485915 303 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AL079303.1-201ENST00000486611 463 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 OR5BK1P-201ENST00000550421 823 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AC010615.3-201ENST00000597319 394 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 MIR6070-201ENST00000613967 103 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AC073263.3-201ENST00000624449 858 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 TSHZ2-205ENST00000626626 670 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 AC004014.2-201ENST00000623718 5122 ntBASIC7.08□□□□□ -1.28
DKK3Q9UBP4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
DKK3Q9UBP4 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 OR52N3P-201ENST00000413417 934 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AL845321.1-201ENST00000444603 348 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC009244.1-201ENST00000450566 258 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 RPL34P34-201ENST00000465389 354 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC023818.1-201ENST00000498379 384 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 SSX8-201ENST00000506270 579 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 GTF2IP11-201ENST00000526931 420 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC100832.2-201ENST00000582080 776 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 RPS27AP19-201ENST00000597285 458 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AL583832.1-201ENST00000603227 784 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC073389.3-201ENST00000609434 935 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms