Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 GOLGA8CP-201ENST00000446144 5237 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 MROH3P-201ENST00000435735 2676 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 MIR375-201ENST00000362103 64 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 AC090616.1-201ENST00000583895 447 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 AC245014.3-201ENST00000618589 347 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 AC245096.1-201ENST00000413104 546 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 FMO7P-201ENST00000436045 768 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 VN1R110P-201ENST00000438988 971 ntBASIC6.68□□□□□ -1.34
CHD7Q9P2D1 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHD7Q9P2D1 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 RPSAP37-201ENST00000470913 821 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC027026.1-201ENST00000532323 742 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AF287957.1-201ENST00000607368 1595 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC011447.6-201ENST00000623510 2598 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 RNA5SP46-201ENST00000362370 120 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 SNORD16-201ENST00000362803 99 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 RPL36AP39-201ENST00000445859 318 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 OR8G3P-201ENST00000533406 921 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC139795.3-201ENST00000606358 541 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC026367.2-201ENST00000610630 553 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC010998.3-201ENST00000613871 631 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 AC091544.5-201ENST00000620192 3815 ntBASIC6.67□□□□□ -1.34
CHD7Q9P2D1 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CHD7Q9P2D1 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CHD7Q9P2D1 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CHD7Q9P2D1 RNA5SP514-201ENST00000363717 111 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms