Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RSL24D1P1-201ENST00000404972 493 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AL512504.1-201ENST00000415494 778 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AL390840.1-201ENST00000420303 988 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 MTND5P8-201ENST00000449817 1083 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 TVP23BP2-201ENST00000455082 615 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 RN7SL797P-201ENST00000486314 297 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 LINC01085-203ENST00000511195 326 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 IGLV1-62-201ENST00000518003 441 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC104997.1-201ENST00000519761 717 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC138701.1-201ENST00000524329 714 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 FRG2IP-201ENST00000563581 781 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC023827.2-201ENST00000566880 1061 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AL035417.2-201ENST00000603887 796 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC241377.2-202ENST00000636462 997 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AL136298.2-201ENST00000556497 1570 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC079248.1-201ENST00000427568 1546 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
AMBRA1Q9C0C7 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.59□□□□□ -1.36
AMBRA1Q9C0C7 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
AMBRA1Q9C0C7 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.59□□□□□ -1.36
AMBRA1Q9C0C7 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 SNORA73B-201ENST00000363217 204 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 SNORA51.7-201ENST00000384171 134 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 RN7SKP236-201ENST00000410635 284 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 FTOP1-201ENST00000419363 861 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 MTATP6P17-201ENST00000431030 672 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC108729.1-201ENST00000487812 947 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC008040.4-201ENST00000494834 768 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 OR7E154P-201ENST00000525174 932 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC016144.1-201ENST00000548175 1087 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 OR4N3P-201ENST00000559395 818 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AL078624.2-201ENST00000605063 554 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 GAPDHP41-201ENST00000613707 975 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC091046.2-201ENST00000620775 665 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC135068.4-201ENST00000622949 925 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC004943.1-203ENST00000624370 1074 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms