Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 RN7SKP89-201ENST00000410774 242 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 RN7SKP85-201ENST00000411349 318 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AL627308.2-201ENST00000420014 432 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 MED15P9-201ENST00000424716 533 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC021876.1-201ENST00000425959 359 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 PSMA6P2-201ENST00000457574 686 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC021220.1-201ENST00000507445 630 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC006070.1-201ENST00000508151 193 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 RPL37-205ENST00000509877 637 ntTSL 5 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC068631.3-201ENST00000538831 225 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC090115.2-201ENST00000548060 883 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 RN7SL155P-201ENST00000581538 263 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 RPS27AP19-201ENST00000597285 458 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC125494.2-201ENST00000602431 657 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC108451.2-201ENST00000603875 538 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 MIR6751-201ENST00000610479 63 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC138904.2-201ENST00000614412 107 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 OR1N1-202ENST00000619659 939 ntBASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AC140134.1-201ENST00000511830 3544 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC232271.1-201ENST00000602455 2715 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 HSPD1P8-201ENST00000400121 1658 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC079949.2-201ENST00000617117 2933 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 RNU1-21P-201ENST00000363327 163 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 SNORA35-201ENST00000386104 128 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 OR4F7P-201ENST00000402444 931 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 OR4F1P-201ENST00000405102 938 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 OR4F2P-201ENST00000424047 938 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 RPSAP62-201ENST00000432596 833 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 CYP2C56P-201ENST00000440076 291 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AL161626.1-201ENST00000441480 490 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC002553.1-201ENST00000442828 802 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC093799.1-201ENST00000452411 499 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 RN7SL791P-201ENST00000467868 295 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC096743.1-201ENST00000485172 319 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC023794.3-204ENST00000510754 236 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC122713.1-201ENST00000518368 1015 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 IGKV2OR22-4-201ENST00000523309 367 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AP006587.2-201ENST00000530696 493 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC079866.1-201ENST00000534985 1220 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC087257.2-201ENST00000538759 928 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AL135978.1-201ENST00000553618 1266 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC133569.1-201ENST00000564327 373 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 OR7A8P-201ENST00000595427 913 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms