Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC068044.1-201ENST00000441585 1978 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 CASP5-202ENST00000393141 1488 ntTSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 RNU6-797P-201ENST00000363101 109 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 RNA5SP141-201ENST00000364543 120 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC084880.1-201ENST00000392530 545 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 MAML3-201ENST00000398940 831 ntTSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 TCEA1P4-201ENST00000415066 844 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 FAM213AP1-201ENST00000418757 668 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 PTP4A1P1-201ENST00000420539 515 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 UBE2V1P7-201ENST00000446395 340 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AL158829.1-201ENST00000449258 478 ntTSL 3 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC003071.1-201ENST00000451219 789 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AL663058.1-201ENST00000453379 353 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 POLR2CP1-201ENST00000453699 765 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 MTND1P16-201ENST00000465177 898 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AL590867.2-201ENST00000492974 447 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 TDGF1P3-201ENST00000493351 567 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC091874.2-201ENST00000505889 720 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC017007.1-201ENST00000511960 415 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC107074.1-201ENST00000513617 764 ntTSL 3 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC087808.1-201ENST00000520501 361 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 ZNF252P-203ENST00000527222 876 ntTSL 2 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 LMO3-222ENST00000540445 906 ntTSL 2 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AL357153.2-201ENST00000556646 565 ntTSL 4 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 RPL23AP86-201ENST00000573796 541 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 SNORA59B-202ENST00000578183 701 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 MIR4440-201ENST00000583986 98 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 LAMTOR5-AS1-211ENST00000598350 749 ntTSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC048341.3-201ENST00000619323 491 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 LINC01727-202ENST00000623256 1218 ntTSL 4 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 PKP4-218ENST00000629219 162 ntTSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC105233.5-202ENST00000642083 4132 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 FGF7P2-201ENST00000332473 296 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 OLA1P1-201ENST00000396387 1189 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 PHBP7-201ENST00000415677 814 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AC093716.1-201ENST00000435923 377 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 PNPLA4P1-201ENST00000458328 305 ntBASIC7.94□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL305P-201ENST00000464862 281 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms