Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 RNU4-76P-201ENST00000364509 141 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 Y_RNA.359-201ENST00000365498 102 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 SNORA14B-201ENST00000384452 135 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 RN7SKP110-201ENST00000410146 285 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC111200.2-201ENST00000418877 505 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 RPL36P1-201ENST00000419720 225 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC116050.1-206ENST00000423774 213 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 HMGN2P24-201ENST00000433516 273 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC004006.1-201ENST00000434994 377 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 USP9YP35-201ENST00000435696 412 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AL590609.1-201ENST00000442164 328 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 RPS6P2-201ENST00000454208 705 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 IGLVI-68-201ENST00000519525 345 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 NDUFA5P2-201ENST00000519723 344 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AP001646.1-201ENST00000527936 915 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 PDCL2P2-201ENST00000533651 189 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 BCAP31P2-201ENST00000563143 399 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 BCAP31P1-201ENST00000565437 385 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC010327.2-201ENST00000587647 488 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC087683.1-201ENST00000591187 441 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AP001836.1-201ENST00000604675 523 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 HMGB1P51-201ENST00000605166 638 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC055876.5-201ENST00000605667 259 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC104117.5-201ENST00000606195 547 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 FAM30B-201ENST00000611556 397 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC013476.2-201ENST00000614456 459 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC009509.4-201ENST00000619202 509 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 HLA-B-258ENST00000640615 240 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 LINC01808-202ENST00000641680 1116 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AC107058.1-201ENST00000513297 1384 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 NCLP2-201ENST00000416078 1462 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC011477.1-204ENST00000623416 1325 ntBASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.32□□□□□ -1.08
FOXR1Q6PIV2 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms