Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 AL627224.1-201ENST00000448334 444 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.5□□□□□ -1.37
NKX6-1P78426 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 CCRL1P1-201ENST00000449542 1053 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 AC092570.2-201ENST00000452117 1143 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 CEACAMP11-201ENST00000455211 583 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AL390026.1-201ENST00000456647 457 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 CTSLP6-201ENST00000458273 1002 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC063955.1-201ENST00000462872 685 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.5□□□□□ -1.37
NKX6-1P78426 NPM1P29-201ENST00000483112 803 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC025271.1-201ENST00000485045 429 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC096743.1-201ENST00000485172 319 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 RPL21P42-201ENST00000488408 464 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.5□□□□□ -1.37
NKX6-1P78426 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.5□□□□□ -1.37
NKX6-1P78426 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 UBE2CP4-201ENST00000561405 535 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.5□□□□□ -1.37
NKX6-1P78426 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AC126323.4-201ENST00000566935 234 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AC005726.4-201ENST00000582858 458 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.5□□□□□ -1.37
NKX6-1P78426 AC068620.3-201ENST00000602749 560 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AL390058.1-201ENST00000603834 629 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC034236.3-201ENST00000605999 461 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC015922.4-201ENST00000612568 690 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 AC006335.3-201ENST00000613408 292 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 HTR1DP1-201ENST00000616500 888 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 RPSAP68-201ENST00000625020 438 ntBASIC6.5□□□□□ -1.37
NKX6-1P78426 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.5□□□□□ -1.37
NKX6-1P78426 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX6-1P78426 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NKX6-1P78426 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
NKX6-1P78426 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 SNORA73B-201ENST00000363217 204 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 NXT2-204ENST00000372107 937 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
NKX6-1P78426 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 SNORA2C-201ENST00000408564 137 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AC231533.2-201ENST00000419045 978 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 MTND4LP13-201ENST00000425022 298 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AC046176.1-201ENST00000435260 1170 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AL157884.3-201ENST00000448273 1184 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 RBMY2EP-202ENST00000456360 940 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 RPL12P40-201ENST00000467028 488 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 RN7SL705P-201ENST00000481678 294 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 RN7SL332P-201ENST00000482163 254 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.49□□□□□ -1.37
NKX6-1P78426 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.49□□□□□ -1.37
NKX6-1P78426 RPL23AP80-201ENST00000495605 424 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AC233724.10-201ENST00000510454 409 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC114940.1-201ENST00000512162 1265 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 OR56A7P-201ENST00000524865 941 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC087257.2-201ENST00000538759 928 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.49□□□□□ -1.37
NKX6-1P78426 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.49□□□□□ -1.37
NKX6-1P78426 STX8-209ENST00000574431 731 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms