Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.58□□□□□ -1.52
CX3CL1P78423 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.58□□□□□ -1.52
CX3CL1P78423 RPL14P5-201ENST00000436474 730 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 AL604028.2-201ENST00000437848 788 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 PMS2P9-201ENST00000441237 515 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.58□□□□□ -1.52
CX3CL1P78423 SCARNA18.2-201ENST00000516882 84 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.58□□□□□ -1.52
CX3CL1P78423 OR7E154P-201ENST00000525174 932 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 AP001994.1-201ENST00000527539 826 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.58□□□□□ -1.52
CX3CL1P78423 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.58□□□□□ -1.52
CX3CL1P78423 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.58□□□□□ -1.52
CX3CL1P78423 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.58□□□□□ -1.52
CX3CL1P78423 AC091304.5-201ENST00000568969 158 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 MIR4301-201ENST00000577203 66 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 MIR5095-201ENST00000578844 88 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 AC023389.2-201ENST00000580031 955 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.58□□□□□ -1.52
CX3CL1P78423 VN1R81P-201ENST00000602085 372 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 AL031429.2-201ENST00000602605 649 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 AL049840.6-201ENST00000604583 345 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 AC092960.1-201ENST00000604762 351 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 AC087894.3-201ENST00000623682 349 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CX3CL1P78423 AC026108.1-201ENST00000635444 547 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 AL049634.1-201ENST00000453770 1720 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC090774.4-201ENST00000578888 1372 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.57□□□□□ -1.52
CX3CL1P78423 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CX3CL1P78423 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 UGT2B27P-201ENST00000505092 1620 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CX3CL1P78423 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AL589826.1-201ENST00000340697 249 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 RNA5SP114-201ENST00000363780 113 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 RNU12-2P-201ENST00000364789 156 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CX3CL1P78423 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CX3CL1P78423 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AL359633.1-201ENST00000421403 310 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 MYO5BP3-201ENST00000431872 1279 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.57□□□□□ -1.52
CX3CL1P78423 Z85994.2-201ENST00000434327 452 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.57□□□□□ -1.52
CX3CL1P78423 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC073072.2-201ENST00000447425 348 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.57□□□□□ -1.52
CX3CL1P78423 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AL356390.1-201ENST00000455684 397 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.57□□□□□ -1.52
CX3CL1P78423 RPSAP48-201ENST00000466509 889 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.57□□□□□ -1.52
CX3CL1P78423 MTND6P8-201ENST00000503471 522 ntBASIC5.57□□□□□ -1.52
CX3CL1P78423 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.57□□□□□ -1.52
CX3CL1P78423 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CX3CL1P78423 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms