Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.5□□□□□ -1.53
CCL3L1P16619 ANP32BP1-202ENST00000568553 737 ntBASIC5.5□□□□□ -1.53
CCL3L1P16619 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.5□□□□□ -1.53
CCL3L1P16619 RN7SL270P-201ENST00000579643 281 ntBASIC5.5□□□□□ -1.53
CCL3L1P16619 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.5□□□□□ -1.53
CCL3L1P16619 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCL3L1P16619 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.5□□□□□ -1.53
CCL3L1P16619 OR1N1-202ENST00000619659 939 ntBASIC5.5□□□□□ -1.53
CCL3L1P16619 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.5□□□□□ -1.53
CCL3L1P16619 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.5□□□□□ -1.53
CCL3L1P16619 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.5□□□□□ -1.53
CCL3L1P16619 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.5□□□□□ -1.53
CCL3L1P16619 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.5□□□□□ -1.53
CCL3L1P16619 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCL3L1P16619 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCL3L1P16619 AC092725.2-201ENST00000567658 1389 ntBASIC5.5□□□□□ -1.53
CCL3L1P16619 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCL3L1P16619 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCL3L1P16619 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCL3L1P16619 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCL3L1P16619 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCL3L1P16619 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.5□□□□□ -1.53
CCL3L1P16619 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
CCL3L1P16619 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CCL3L1P16619 AL139384.2-201ENST00000613809 3590 ntBASIC5.5□□□□□ -1.53
CCL3L1P16619 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCL3L1P16619 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.5□□□□□ -1.53
CCL3L1P16619 MTCO1P25-201ENST00000414449 1799 ntBASIC5.5□□□□□ -1.53
CCL3L1P16619 AL033543.1-201ENST00000623440 13454 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL3L1P16619 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL3L1P16619 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL3L1P16619 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 MAPK10-323ENST00000641493 3207 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCL3L1P16619 FDPSP5-201ENST00000399474 1057 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 AL049697.3-201ENST00000406493 982 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 AC096537.2-201ENST00000413707 714 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL3L1P16619 CDC42P6-201ENST00000421246 576 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 SPATA20P1-201ENST00000423089 438 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AP003385.1-201ENST00000426387 893 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC099340.1-201ENST00000475247 599 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 AC117395.1-201ENST00000487390 403 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 RPL5P33-201ENST00000487833 905 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 RN7SKP196-201ENST00000516267 345 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL3L1P16619 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 OR4C49P-201ENST00000563891 900 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC027796.1-201ENST00000575593 512 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 MIR5010-201ENST00000582846 120 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL3L1P16619 AL035425.4-201ENST00000624509 1063 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL3L1P16619 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL3L1P16619 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 AC007485.2-201ENST00000623493 1667 ntBASIC5.49□□□□□ -1.53
CCL3L1P16619 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 USP48-203ENST00000374732 3037 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL3L1P16619 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL3L1P16619 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCL3L1P16619 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.48□□□□□ -1.53
CCL3L1P16619 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCL3L1P16619 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms