Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.96□□□□□ -1.14
HLA-DOAP06340 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
HLA-DOAP06340 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.96□□□□□ -1.14
HLA-DOAP06340 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.96□□□□□ -1.14
HLA-DOAP06340 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.96□□□□□ -1.14
HLA-DOAP06340 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-DOAP06340 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
HLA-DOAP06340 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 RPL24P4-201ENST00000326586 421 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 RN7SKP187-201ENST00000365536 330 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 RN7SKP271-201ENST00000410528 320 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 RPS7P12-201ENST00000422385 582 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 DUTP4-201ENST00000424782 475 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 RPS6P14-201ENST00000425165 719 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC093870.1-201ENST00000506837 213 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 GUSBP9-201ENST00000510138 584 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 OR52H2P-201ENST00000514607 902 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC122713.1-201ENST00000518368 1015 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 OR4A41P-201ENST00000533053 928 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC124891.1-201ENST00000536322 519 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC107958.1-201ENST00000556576 290 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC114477.1-201ENST00000605097 605 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-DOAP06340 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-DOAP06340 AC122713.2-201ENST00000624942 3335 ntBASIC7.95□□□□□ -1.14
HLA-DOAP06340 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 SMG1P5-202ENST00000529428 4219 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 SMG1P2-201ENST00000566127 4221 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 AC138915.4-201ENST00000565549 4147 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 RN7SKP171-201ENST00000364417 303 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 U3.52-201ENST00000384034 216 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 MIR1204-201ENST00000408388 67 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 RN7SKP129-201ENST00000410288 299 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 RPSAP32-201ENST00000432681 526 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 CDK7P1-201ENST00000434574 693 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 CRYGGP-201ENST00000443337 145 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 AC007383.1-201ENST00000445875 636 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 AC023310.2-201ENST00000553844 547 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 WBP1LP12-201ENST00000604449 331 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 AC011891.2-201ENST00000604949 397 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 AC091768.1-201ENST00000609258 930 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-DOAP06340 AL132796.3-201ENST00000624703 900 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 RPSAP68-201ENST00000625020 438 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 PSMC1P6-201ENST00000477233 1319 ntBASIC7.94□□□□□ -1.14
HLA-DOAP06340 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-DOAP06340 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms