Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 AL121906.2-201ENST00000621597 723 ntBASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN16Q9Y5I7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 AL359736.2-201ENST00000621992 437 ntBASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN16Q9Y5I7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 AC133681.1-201ENST00000465482 601 ntBASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 RPPH1-201ENST00000516869 333 ntBASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 AC124016.1-201ENST00000609552 612 ntBASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 AL023875.1-201ENST00000640777 796 ntBASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN16Q9Y5I7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN16Q9Y5I7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.52■□□□□ 0.55
CLDN16Q9Y5I7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN16Q9Y5I7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN16Q9Y5I7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN16Q9Y5I7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN16Q9Y5I7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN16Q9Y5I7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN16Q9Y5I7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN16Q9Y5I7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN16Q9Y5I7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN16Q9Y5I7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN16Q9Y5I7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN16Q9Y5I7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms