Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 HLA-B-256ENST00000639848 1089 ntBASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA4Q9Y5G9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 CYP2T3P-201ENST00000601990 817 ntBASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 FAM197Y4-202ENST00000622692 608 ntBASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 AC007225.1-201ENST00000566331 1836 ntBASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA4Q9Y5G9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 PGM5P4-201ENST00000421970 445 ntBASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 AP001002.2-201ENST00000625137 386 ntBASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 FP700111.2-201ENST00000619190 1892 ntBASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA4Q9Y5G9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 RPPH1-201ENST00000516869 333 ntBASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 AC087289.5-201ENST00000586076 3175 ntBASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDHGA4Q9Y5G9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms