Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 AC006557.6-201ENST00000623071 864 ntBASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 KRT8P17-201ENST00000453110 1448 ntBASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 HLA-G-202ENST00000376815 851 ntBASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 HLA-G-203ENST00000376818 1127 ntBASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 BX088651.1-201ENST00000540551 451 ntBASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 AL031963.3-201ENST00000606441 850 ntBASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB9Q9Y5E1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 POM121L13P-201ENST00000422362 380 ntBASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 AC233263.1-201ENST00000578059 224 ntBASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB9Q9Y5E1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 AP001412.1-201ENST00000608405 714 ntBASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB9Q9Y5E1 AL391422.3-201ENST00000603791 2761 ntBASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 AL162377.1-201ENST00000618844 1793 ntBASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB9Q9Y5E1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms