Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.67■■□□□ 1.7
PDZRN3Q9UPQ7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PDZRN3Q9UPQ7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.67■■□□□ 1.7
PDZRN3Q9UPQ7 AL162377.1-201ENST00000618844 1793 ntBASIC25.67■■□□□ 1.7
PDZRN3Q9UPQ7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 AC012306.2-201ENST00000609350 630 ntBASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 AL023875.1-201ENST00000640777 796 ntBASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
PDZRN3Q9UPQ7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 AC087499.1-201ENST00000418141 1075 ntBASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 AC005829.2-201ENST00000571422 1056 ntBASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 AC133561.5-201ENST00000635547 218 ntBASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
PDZRN3Q9UPQ7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.64■■□□□ 1.7
PDZRN3Q9UPQ7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.64■■□□□ 1.69
PDZRN3Q9UPQ7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PDZRN3Q9UPQ7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
PDZRN3Q9UPQ7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PDZRN3Q9UPQ7 AC116050.2-201ENST00000612102 1779 ntBASIC25.64■■□□□ 1.69
PDZRN3Q9UPQ7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
PDZRN3Q9UPQ7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 AC112907.3-201ENST00000577781 2400 ntBASIC25.63■■□□□ 1.69
PDZRN3Q9UPQ7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 AC113410.3-201ENST00000623366 203 ntBASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms