Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 PGM5P4-201ENST00000421970 445 ntBASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTI1BQ9UEU0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.52■□□□□ 0.71
VTI1BQ9UEU0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
VTI1BQ9UEU0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
VTI1BQ9UEU0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTI1BQ9UEU0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 Z82202.1-201ENST00000623446 1880 ntBASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 CDV3P1-201ENST00000471403 739 ntBASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 AC231657.2-201ENST00000624556 255 ntBASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
VTI1BQ9UEU0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 CDCA4P2-201ENST00000441182 718 ntBASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 AC013268.1-206ENST00000638368 961 ntBASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 AC112229.1-201ENST00000639295 961 ntBASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 AC073111.5-205ENST00000641717 521 ntBASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.49■□□□□ 0.71
VTI1BQ9UEU0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms