Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.24■□□□□ 0.83
UBP1Q9NZI7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 HLA-G-202ENST00000376815 851 ntBASIC20.24■□□□□ 0.83
UBP1Q9NZI7 HLA-G-203ENST00000376818 1127 ntBASIC20.24■□□□□ 0.83
UBP1Q9NZI7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 AL355802.2-201ENST00000402069 882 ntBASIC20.24■□□□□ 0.83
UBP1Q9NZI7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.24■□□□□ 0.83
UBP1Q9NZI7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 KRT16P6-202ENST00000425692 1426 ntBASIC20.23■□□□□ 0.83
UBP1Q9NZI7 AC097658.1-201ENST00000475555 843 ntBASIC20.23■□□□□ 0.83
UBP1Q9NZI7 AC023632.3-201ENST00000521633 145 ntBASIC20.23■□□□□ 0.83
UBP1Q9NZI7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 AC125437.2-201ENST00000625180 2167 ntBASIC20.23■□□□□ 0.83
UBP1Q9NZI7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBP1Q9NZI7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 MYC-209ENST00000641252 345 ntBASIC20.22■□□□□ 0.83
UBP1Q9NZI7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBP1Q9NZI7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 AC083880.1-201ENST00000608266 535 ntBASIC20.21■□□□□ 0.83
UBP1Q9NZI7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBP1Q9NZI7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms