Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GCM1Q9NP62 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GCM1Q9NP62 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 SMG8-203ENST00000578922 2178 ntBASIC16.96■□□□□ 0.31
GCM1Q9NP62 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.96■□□□□ 0.31
GCM1Q9NP62 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 MIR4651-201ENST00000582622 73 ntBASIC16.96■□□□□ 0.31
GCM1Q9NP62 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GCM1Q9NP62 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
GCM1Q9NP62 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GCM1Q9NP62 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GCM1Q9NP62 KRT8P20-201ENST00000423953 1409 ntBASIC16.96■□□□□ 0.3
GCM1Q9NP62 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 GABARAPL3-202ENST00000624044 1851 ntBASIC16.95■□□□□ 0.3
GCM1Q9NP62 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 HLA-G-202ENST00000376815 851 ntBASIC16.95■□□□□ 0.3
GCM1Q9NP62 HLA-G-203ENST00000376818 1127 ntBASIC16.95■□□□□ 0.3
GCM1Q9NP62 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 KRT8P17-201ENST00000453110 1448 ntBASIC16.95■□□□□ 0.3
GCM1Q9NP62 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GCM1Q9NP62 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCM1Q9NP62 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 AL157384.1-201ENST00000445995 2473 ntBASIC16.94■□□□□ 0.3
GCM1Q9NP62 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 UNC93B4-201ENST00000505679 747 ntBASIC16.94■□□□□ 0.3
GCM1Q9NP62 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 SOX15-203ENST00000570788 1093 ntBASIC16.94■□□□□ 0.3
GCM1Q9NP62 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 AL031963.3-201ENST00000606441 850 ntBASIC16.94■□□□□ 0.3
GCM1Q9NP62 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCM1Q9NP62 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
GCM1Q9NP62 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GCM1Q9NP62 AC092667.1-201ENST00000434301 2586 ntBASIC16.93■□□□□ 0.3
GCM1Q9NP62 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.93■□□□□ 0.3
GCM1Q9NP62 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.93■□□□□ 0.3
GCM1Q9NP62 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.93■□□□□ 0.3
GCM1Q9NP62 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GCM1Q9NP62 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GCM1Q9NP62 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms