Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 TMEM191A-211ENST00000637163 1067 ntBASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEUROD4Q9HD90 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 AC125437.2-201ENST00000625180 2167 ntBASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 AL355472.2-201ENST00000422958 438 ntBASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 AC023632.3-201ENST00000521633 145 ntBASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 C2orf69P4-201ENST00000565394 541 ntBASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 AC133552.2-202ENST00000575694 574 ntBASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 AC009237.14-201ENST00000609975 1594 ntBASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEUROD4Q9HD90 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 AC093787.1-201ENST00000450396 207 ntBASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEUROD4Q9HD90 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEUROD4Q9HD90 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 AP001271.2-201ENST00000624018 1556 ntBASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms