Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC29.49■■■□□ 2.31
SCAF1Q9H7N4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
SCAF1Q9H7N4 RBM17P2-201ENST00000616397 1405 ntBASIC29.49■■■□□ 2.31
SCAF1Q9H7N4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SCAF1Q9H7N4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 AP004607.7-201ENST00000527152 1677 ntBASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCAF1Q9H7N4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 PENK-204ENST00000518770 863 ntTSL 2 BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 AC008175.2-201ENST00000612840 297 ntBASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF1Q9H7N4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 POM121L13P-201ENST00000422362 380 ntBASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 AL135905.2-201ENST00000584934 1404 ntBASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF1Q9H7N4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC29.45■■■□□ 2.31
SCAF1Q9H7N4 SERPINA7P1-201ENST00000443077 631 ntBASIC29.45■■■□□ 2.31
SCAF1Q9H7N4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
SCAF1Q9H7N4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC29.45■■■□□ 2.31
SCAF1Q9H7N4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC29.45■■■□□ 2.31
SCAF1Q9H7N4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SCAF1Q9H7N4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
SCAF1Q9H7N4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
SCAF1Q9H7N4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
SCAF1Q9H7N4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 SLC29A4P2-201ENST00000504749 1089 ntBASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 AL023875.1-201ENST00000640777 796 ntBASIC29.45■■■□□ 2.3
SCAF1Q9H7N4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 AC005363.2-201ENST00000618631 242 ntBASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF1Q9H7N4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms