Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 AC092720.2-201ENST00000602388 1665 ntBASIC23.23■■□□□ 1.31
SH2D4AQ9H788 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SH2D4AQ9H788 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 AP002982.1-201ENST00000492365 877 ntBASIC23.22■■□□□ 1.31
SH2D4AQ9H788 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 CD177P1-201ENST00000606252 935 ntBASIC23.22■■□□□ 1.31
SH2D4AQ9H788 AL353708.3-201ENST00000610272 989 ntBASIC23.22■■□□□ 1.31
SH2D4AQ9H788 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
SH2D4AQ9H788 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 AL355355.2-201ENST00000442321 338 ntBASIC23.21■■□□□ 1.31
SH2D4AQ9H788 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 LINC01023-201ENST00000606054 436 ntBASIC23.21■■□□□ 1.31
SH2D4AQ9H788 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SH2D4AQ9H788 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SH2D4AQ9H788 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 AC211429.1-201ENST00000415277 523 ntBASIC23.19■■□□□ 1.3
SH2D4AQ9H788 ECEL1P3-201ENST00000427961 737 ntBASIC23.19■■□□□ 1.3
SH2D4AQ9H788 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 AL355075.4-201ENST00000554988 638 ntBASIC23.19■■□□□ 1.3
SH2D4AQ9H788 AP003071.4-201ENST00000562276 1284 ntBASIC23.19■■□□□ 1.3
SH2D4AQ9H788 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SH2D4AQ9H788 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SH2D4AQ9H788 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms