Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRN3Q9H3W5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 AP003071.4-201ENST00000562276 1284 ntBASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 CD177P1-201ENST00000606252 935 ntBASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 AC004264.1-201ENST00000608354 794 ntBASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRN3Q9H3W5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 MIR1224-201ENST00000408193 85 ntBASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.27■□□□□ 0.68
LRRN3Q9H3W5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRRN3Q9H3W5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
LRRN3Q9H3W5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
LRRN3Q9H3W5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRN3Q9H3W5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 FAM197Y1-201ENST00000421178 764 ntBASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 KRT18P21-201ENST00000515767 1272 ntBASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 AC073195.1-201ENST00000607241 877 ntBASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRN3Q9H3W5 KRT8P20-201ENST00000423953 1409 ntBASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 PTBP1P-201ENST00000554374 1601 ntBASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 AL031963.3-201ENST00000606441 850 ntBASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LRRN3Q9H3W5 FEM1AP4-201ENST00000443167 1987 ntBASIC19.24■□□□□ 0.67
LRRN3Q9H3W5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRN3Q9H3W5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRN3Q9H3W5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRN3Q9H3W5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRN3Q9H3W5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LRRN3Q9H3W5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRN3Q9H3W5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRN3Q9H3W5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms