Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 AC133552.2-202ENST00000575694 574 ntBASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC68Q9H2F9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 LSM12P1-201ENST00000411836 588 ntBASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 CDCA4P2-201ENST00000441182 718 ntBASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 AF201337.1-201ENST00000520239 748 ntBASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC68Q9H2F9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC68Q9H2F9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 MIR663A-201ENST00000385250 93 ntBASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC68Q9H2F9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 MKRN4P-201ENST00000444706 1521 ntBASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 AC105036.2-201ENST00000569468 176 ntBASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC68Q9H2F9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 KRT8P20-201ENST00000423953 1409 ntBASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 KRT8P17-201ENST00000453110 1448 ntBASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 AL031963.3-201ENST00000606441 850 ntBASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC68Q9H2F9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 AFG3L1P-217ENST00000557444 2447 ntBASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 KRT16P6-202ENST00000425692 1426 ntBASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 HLA-G-202ENST00000376815 851 ntBASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 HLA-G-203ENST00000376818 1127 ntBASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 AC006970.2-201ENST00000450065 779 ntBASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 C2orf69P4-201ENST00000565394 541 ntBASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC68Q9H2F9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms