Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX47Q9H0S4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 PGM5P4-201ENST00000421970 445 ntBASIC20.69■□□□□ 0.9
DDX47Q9H0S4 KRT18P14-201ENST00000534205 1250 ntBASIC20.69■□□□□ 0.9
DDX47Q9H0S4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 AC005837.3-201ENST00000612163 286 ntBASIC20.69■□□□□ 0.9
DDX47Q9H0S4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX47Q9H0S4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 UBE2DNL-204ENST00000602536 740 ntBASIC20.68■□□□□ 0.9
DDX47Q9H0S4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 CYP21A1P-202ENST00000354927 1481 ntBASIC20.68■□□□□ 0.9
DDX47Q9H0S4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 AL032819.2-201ENST00000624543 2162 ntBASIC20.68■□□□□ 0.9
DDX47Q9H0S4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
DDX47Q9H0S4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 YBX1P1-201ENST00000445822 960 ntBASIC20.67■□□□□ 0.9
DDX47Q9H0S4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX47Q9H0S4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 KRT18P61-201ENST00000585825 1298 ntBASIC20.66■□□□□ 0.9
DDX47Q9H0S4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX47Q9H0S4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX47Q9H0S4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms