Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 AC128676.1-201ENST00000454392 318 ntBASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 AC073648.6-201ENST00000641589 218 ntBASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM62Q9BVG3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 AC099778.1-201ENST00000568593 1911 ntBASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM62Q9BVG3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRIM62Q9BVG3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRIM62Q9BVG3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 AC018553.1-201ENST00000616682 1458 ntBASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 MTDHP1-201ENST00000605323 784 ntBASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM62Q9BVG3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM62Q9BVG3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms