Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 KRT17P1-201ENST00000399211 1546 ntBASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP1Q8TDR0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 HCG11-201ENST00000411553 5696 ntBASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP1Q8TDR0 KRT16P6-202ENST00000425692 1426 ntBASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 MKRN4P-201ENST00000444706 1521 ntBASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 HLA-G-202ENST00000376815 851 ntBASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 HLA-G-203ENST00000376818 1127 ntBASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 AF201337.1-201ENST00000520239 748 ntBASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 C2orf69P4-201ENST00000565394 541 ntBASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 AC105036.2-201ENST00000569468 176 ntBASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP1Q8TDR0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP1Q8TDR0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 TMEM179-206ENST00000616017 1645 ntBASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP1Q8TDR0 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms