Protein–RNA interactions for Protein: Q8TBZ0

CCDC110, Coiled-coil domain-containing protein 110, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110Q8TBZ0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 PTBP1P-201ENST00000554374 1601 ntBASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC110Q8TBZ0 AC125437.2-201ENST00000625180 2167 ntBASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC110Q8TBZ0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 AC093787.1-201ENST00000450396 207 ntBASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 AC005181.1-201ENST00000604782 1256 ntBASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC110Q8TBZ0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC110Q8TBZ0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC110Q8TBZ0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC110Q8TBZ0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 OR10C1-204ENST00000622521 1039 ntBASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 AC010980.2-201ENST00000587099 1412 ntBASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC110Q8TBZ0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC110Q8TBZ0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC110Q8TBZ0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC110Q8TBZ0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC110Q8TBZ0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC110Q8TBZ0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC110Q8TBZ0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms