Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AL355075.4-201ENST00000554988 638 ntBASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 CD177P1-201ENST00000606252 935 ntBASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 AC004264.1-201ENST00000608354 794 ntBASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A9Q8NBW4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 AC026471.5-201ENST00000615068 467 ntBASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A9Q8NBW4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
SLC38A9Q8NBW4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
SLC38A9Q8NBW4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC38A9Q8NBW4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 FAM197Y1-201ENST00000421178 764 ntBASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A9Q8NBW4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 AL353807.1-201ENST00000427475 662 ntBASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 AP003071.4-201ENST00000562276 1284 ntBASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A9Q8NBW4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms