Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.21■□□□□ 0.83
PGBD3Q8N328 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.21■□□□□ 0.83
PGBD3Q8N328 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD3Q8N328 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD3Q8N328 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
PGBD3Q8N328 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD3Q8N328 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PGBD3Q8N328 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.21■□□□□ 0.83
PGBD3Q8N328 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD3Q8N328 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.21■□□□□ 0.83
PGBD3Q8N328 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD3Q8N328 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD3Q8N328 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PGBD3Q8N328 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD3Q8N328 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD3Q8N328 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
PGBD3Q8N328 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PGBD3Q8N328 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PGBD3Q8N328 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.2■□□□□ 0.82
PGBD3Q8N328 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.2■□□□□ 0.82
PGBD3Q8N328 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.2■□□□□ 0.82
PGBD3Q8N328 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.2■□□□□ 0.82
PGBD3Q8N328 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD3Q8N328 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD3Q8N328 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD3Q8N328 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.2■□□□□ 0.82
PGBD3Q8N328 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD3Q8N328 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.19■□□□□ 0.82
PGBD3Q8N328 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD3Q8N328 AC121338.2-201ENST00000622535 1744 ntBASIC20.19■□□□□ 0.82
PGBD3Q8N328 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.19■□□□□ 0.82
PGBD3Q8N328 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD3Q8N328 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD3Q8N328 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PGBD3Q8N328 HLA-G-202ENST00000376815 851 ntBASIC20.19■□□□□ 0.82
PGBD3Q8N328 HLA-G-203ENST00000376818 1127 ntBASIC20.19■□□□□ 0.82
PGBD3Q8N328 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.19■□□□□ 0.82
PGBD3Q8N328 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.19■□□□□ 0.82
PGBD3Q8N328 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.19■□□□□ 0.82
PGBD3Q8N328 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.19■□□□□ 0.82
PGBD3Q8N328 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.19■□□□□ 0.82
PGBD3Q8N328 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.19■□□□□ 0.82
PGBD3Q8N328 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD3Q8N328 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD3Q8N328 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD3Q8N328 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD3Q8N328 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD3Q8N328 MMP23A-201ENST00000234610 1017 ntBASIC20.18■□□□□ 0.82
PGBD3Q8N328 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.18■□□□□ 0.82
PGBD3Q8N328 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.18■□□□□ 0.82
PGBD3Q8N328 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.18■□□□□ 0.82
PGBD3Q8N328 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.18■□□□□ 0.82
PGBD3Q8N328 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD3Q8N328 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD3Q8N328 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.18■□□□□ 0.82
PGBD3Q8N328 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD3Q8N328 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 FEM1AP4-201ENST00000443167 1987 ntBASIC20.17■□□□□ 0.82
PGBD3Q8N328 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 AP002982.1-201ENST00000492365 877 ntBASIC20.17■□□□□ 0.82
PGBD3Q8N328 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.17■□□□□ 0.82
PGBD3Q8N328 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD3Q8N328 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD3Q8N328 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PGBD3Q8N328 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD3Q8N328 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD3Q8N328 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD3Q8N328 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD3Q8N328 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PGBD3Q8N328 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD3Q8N328 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD3Q8N328 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.16■□□□□ 0.82
PGBD3Q8N328 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.16■□□□□ 0.82
PGBD3Q8N328 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.16■□□□□ 0.82
PGBD3Q8N328 AC073195.1-201ENST00000607241 877 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms