Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 AC104771.1-201ENST00000603335 964 ntBASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC116Q8IYX3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 AC097658.1-201ENST00000475555 843 ntBASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC116Q8IYX3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 AC098934.4-201ENST00000564127 592 ntBASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC116Q8IYX3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC116Q8IYX3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms