Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC026185.1-201ENST00000445748 174 ntBASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 AF201337.1-201ENST00000520239 748 ntBASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 AC105036.2-201ENST00000569468 176 ntBASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 AL050303.2-201ENST00000619798 666 ntBASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL3Q8IVW4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL3Q8IVW4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 AP001271.2-201ENST00000624018 1556 ntBASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 AL158211.5-201ENST00000623583 2518 ntBASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDKL3Q8IVW4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.41■□□□□ 0.86
CDKL3Q8IVW4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 RAP2CP1-201ENST00000605103 478 ntBASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDKL3Q8IVW4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms