Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC50Q8IVM0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 AL162412.1-201ENST00000567129 965 ntBASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC50Q8IVM0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC50Q8IVM0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 AC125437.2-201ENST00000625180 2167 ntBASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 AL158211.5-201ENST00000623583 2518 ntBASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC50Q8IVM0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC50Q8IVM0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC50Q8IVM0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC50Q8IVM0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms