Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.85■■□□□ 1.25
SH3RF1Q7Z6J0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.85■■□□□ 1.25
SH3RF1Q7Z6J0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SH3RF1Q7Z6J0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SH3RF1Q7Z6J0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.85■■□□□ 1.25
SH3RF1Q7Z6J0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SH3RF1Q7Z6J0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 KRT8P36-201ENST00000489121 1440 ntBASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 AL355075.4-201ENST00000554988 638 ntBASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 AC113410.3-201ENST00000623366 203 ntBASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SH3RF1Q7Z6J0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 AC133681.1-201ENST00000465482 601 ntBASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 AC112907.3-201ENST00000577781 2400 ntBASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SH3RF1Q7Z6J0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
SH3RF1Q7Z6J0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.83■■□□□ 1.24
SH3RF1Q7Z6J0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
SH3RF1Q7Z6J0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 MIR4785-201ENST00000585005 73 ntBASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SH3RF1Q7Z6J0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 CYP21A1P-202ENST00000354927 1481 ntBASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SH3RF1Q7Z6J0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
SH3RF1Q7Z6J0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.8■■□□□ 1.24
SH3RF1Q7Z6J0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.8■■□□□ 1.24
SH3RF1Q7Z6J0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.8■■□□□ 1.24
SH3RF1Q7Z6J0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms