Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.46■■□□□ 1.19
SHC4Q6S5L8 AC005332.7-201ENST00000614046 2005 ntBASIC22.46■■□□□ 1.19
SHC4Q6S5L8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHC4Q6S5L8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHC4Q6S5L8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHC4Q6S5L8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.46■■□□□ 1.19
SHC4Q6S5L8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHC4Q6S5L8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHC4Q6S5L8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHC4Q6S5L8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
SHC4Q6S5L8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SHC4Q6S5L8 HLA-G-202ENST00000376815 851 ntBASIC22.45■■□□□ 1.18
SHC4Q6S5L8 HLA-G-203ENST00000376818 1127 ntBASIC22.45■■□□□ 1.18
SHC4Q6S5L8 CROCCP5-201ENST00000436658 830 ntBASIC22.45■■□□□ 1.18
SHC4Q6S5L8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 AL137784.2-201ENST00000607332 1000 ntBASIC22.45■■□□□ 1.18
SHC4Q6S5L8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 AP001271.2-201ENST00000624018 1556 ntBASIC22.45■■□□□ 1.18
SHC4Q6S5L8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SHC4Q6S5L8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 GPX1P1-201ENST00000388829 606 ntBASIC22.44■■□□□ 1.18
SHC4Q6S5L8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 AC105036.2-201ENST00000569468 176 ntBASIC22.44■■□□□ 1.18
SHC4Q6S5L8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC4Q6S5L8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 PHGDH-210ENST00000641115 1638 ntBASIC22.43■■□□□ 1.18
SHC4Q6S5L8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 MKRN4P-201ENST00000444706 1521 ntBASIC22.43■■□□□ 1.18
SHC4Q6S5L8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 MIR663A-201ENST00000385250 93 ntBASIC22.43■■□□□ 1.18
SHC4Q6S5L8 LSM12P1-201ENST00000411836 588 ntBASIC22.43■■□□□ 1.18
SHC4Q6S5L8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 AC087289.5-201ENST00000586076 3175 ntBASIC22.43■■□□□ 1.18
SHC4Q6S5L8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC4Q6S5L8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 MIR935-201ENST00000401179 91 ntBASIC22.42■■□□□ 1.18
SHC4Q6S5L8 AC026185.1-201ENST00000445748 174 ntBASIC22.42■■□□□ 1.18
SHC4Q6S5L8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 AF201337.1-201ENST00000520239 748 ntBASIC22.42■■□□□ 1.18
SHC4Q6S5L8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHC4Q6S5L8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SHC4Q6S5L8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms