Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 AC011506.1-201ENST00000474329 610 ntBASIC10.99□□□□□ -0.65
UBR4Q5T4S7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 AC016734.2-201ENST00000624325 1377 ntBASIC10.99□□□□□ -0.65
UBR4Q5T4S7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 MIR6799-201ENST00000620297 69 ntBASIC10.99□□□□□ -0.65
UBR4Q5T4S7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 AC096733.2-201ENST00000609937 1394 ntBASIC10.99□□□□□ -0.65
UBR4Q5T4S7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 AL512604.3-201ENST00000569583 964 ntBASIC10.99□□□□□ -0.65
UBR4Q5T4S7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 ELK2BP-201ENST00000415014 1224 ntBASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AC004945.1-201ENST00000416738 983 ntBASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AC011498.5-201ENST00000592027 486 ntBASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AL008721.1-201ENST00000609964 604 ntBASIC10.98□□□□□ -0.65
UBR4Q5T4S7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AC011298.2-201ENST00000617989 482 ntBASIC10.98□□□□□ -0.65
UBR4Q5T4S7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AC022211.4-201ENST00000625094 2161 ntBASIC10.98□□□□□ -0.65
UBR4Q5T4S7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AC064862.7-201ENST00000604520 867 ntBASIC10.98□□□□□ -0.65
UBR4Q5T4S7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBR4Q5T4S7 AKR1C7P-201ENST00000305623 895 ntBASIC10.97□□□□□ -0.65
UBR4Q5T4S7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 ANKRD20A18P-201ENST00000359341 492 ntBASIC10.97□□□□□ -0.65
UBR4Q5T4S7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 YBX1P10-201ENST00000444752 975 ntBASIC10.97□□□□□ -0.65
UBR4Q5T4S7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBR4Q5T4S7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms