Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 GPX1P1-201ENST00000388829 606 ntBASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A4Q4VNC1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 KRT16P6-202ENST00000425692 1426 ntBASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 MIPEPP3-201ENST00000412105 444 ntBASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP13A4Q4VNC1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP13A4Q4VNC1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 GUSBP6-202ENST00000438529 1198 ntBASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 AC006970.2-201ENST00000450065 779 ntBASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 AL121832.2-201ENST00000610979 668 ntBASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 AC009237.14-201ENST00000609975 1594 ntBASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ATP13A4Q4VNC1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 HLA-G-202ENST00000376815 851 ntBASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 HLA-G-203ENST00000376818 1127 ntBASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 AC023632.3-201ENST00000521633 145 ntBASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 AC092666.2-201ENST00000613287 246 ntBASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ATP13A4Q4VNC1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP13A4Q4VNC1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms