Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 UNC93B4-201ENST00000505679 747 ntBASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 RPS2P52-201ENST00000469610 820 ntBASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 SLC25A24-204ENST00000569674 2357 ntBASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
CCSMST1Q4G0I0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCSMST1Q4G0I0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.33■□□□□ 0.69
CCSMST1Q4G0I0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCSMST1Q4G0I0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCSMST1Q4G0I0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCSMST1Q4G0I0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.33■□□□□ 0.69
CCSMST1Q4G0I0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 AC008687.6-201ENST00000596318 630 ntBASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 AC120498.8-201ENST00000614275 531 ntBASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCSMST1Q4G0I0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.32■□□□□ 0.68
CCSMST1Q4G0I0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 AP003097.1-201ENST00000530657 1135 ntBASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCSMST1Q4G0I0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.3■□□□□ 0.68
CCSMST1Q4G0I0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSMST1Q4G0I0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCSMST1Q4G0I0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCSMST1Q4G0I0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms