Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.32■■□□□ 1.32
SHROOM1Q2M3G4 AL137060.1-201ENST00000618151 2648 ntBASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 AL353807.1-201ENST00000427475 662 ntBASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 AP002982.1-201ENST00000492365 877 ntBASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.31■■□□□ 1.32
SHROOM1Q2M3G4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 AC004264.1-201ENST00000608354 794 ntBASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 CR392000.1-201ENST00000624770 1228 ntBASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHROOM1Q2M3G4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 AC092720.2-201ENST00000602388 1665 ntBASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SHROOM1Q2M3G4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 MMP23A-201ENST00000234610 1017 ntBASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SHROOM1Q2M3G4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 NIFKP9-201ENST00000419265 221 ntBASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 AC116351.2-201ENST00000606540 1585 ntBASIC23.27■■□□□ 1.32
SHROOM1Q2M3G4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.31
SHROOM1Q2M3G4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 CYP2D8P-201ENST00000433633 1490 ntBASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 AC018553.1-201ENST00000616682 1458 ntBASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHROOM1Q2M3G4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms