Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 AF228730.7-201ENST00000641842 219 ntBASIC23.33■■□□□ 1.33
HTRA3P83110 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.33■■□□□ 1.32
HTRA3P83110 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HTRA3P83110 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
HTRA3P83110 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
HTRA3P83110 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
HTRA3P83110 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.32■■□□□ 1.32
HTRA3P83110 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HTRA3P83110 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HTRA3P83110 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HTRA3P83110 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
HTRA3P83110 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
HTRA3P83110 AP002469.2-201ENST00000531724 424 ntBASIC23.32■■□□□ 1.32
HTRA3P83110 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
HTRA3P83110 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.32■■□□□ 1.32
HTRA3P83110 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HTRA3P83110 AC093323.1-202ENST00000635031 2045 ntBASIC23.32■■□□□ 1.32
HTRA3P83110 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTRA3P83110 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTRA3P83110 MIR574-201ENST00000385209 96 ntBASIC23.31■■□□□ 1.32
HTRA3P83110 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.31■■□□□ 1.32
HTRA3P83110 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.31■■□□□ 1.32
HTRA3P83110 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HTRA3P83110 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.31■■□□□ 1.32
HTRA3P83110 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
HTRA3P83110 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HTRA3P83110 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTRA3P83110 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.31■■□□□ 1.32
HTRA3P83110 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
HTRA3P83110 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTRA3P83110 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.31■■□□□ 1.32
HTRA3P83110 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HTRA3P83110 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTRA3P83110 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.3■■□□□ 1.32
HTRA3P83110 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HTRA3P83110 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
HTRA3P83110 AC106795.1-205ENST00000512851 1056 ntBASIC23.3■■□□□ 1.32
HTRA3P83110 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.3■■□□□ 1.32
HTRA3P83110 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
HTRA3P83110 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTRA3P83110 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTRA3P83110 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
HTRA3P83110 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTRA3P83110 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTRA3P83110 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.29■■□□□ 1.32
HTRA3P83110 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.29■■□□□ 1.32
HTRA3P83110 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.29■■□□□ 1.32
HTRA3P83110 AC096733.2-201ENST00000609937 1394 ntBASIC23.29■■□□□ 1.32
HTRA3P83110 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTRA3P83110 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTRA3P83110 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.29■■□□□ 1.32
HTRA3P83110 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.29■■□□□ 1.32
HTRA3P83110 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.29■■□□□ 1.32
HTRA3P83110 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.29■■□□□ 1.32
HTRA3P83110 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.29■■□□□ 1.32
HTRA3P83110 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.29■■□□□ 1.32
HTRA3P83110 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.29■■□□□ 1.32
HTRA3P83110 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.29■■□□□ 1.32
HTRA3P83110 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
HTRA3P83110 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HTRA3P83110 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTRA3P83110 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.28■■□□□ 1.32
HTRA3P83110 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.28■■□□□ 1.32
HTRA3P83110 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 AL590627.1-203ENST00000421194 1026 ntBASIC23.28■■□□□ 1.32
HTRA3P83110 PMS2P1-201ENST00000431037 1228 ntBASIC23.28■■□□□ 1.32
HTRA3P83110 CFL1-212ENST00000531413 636 ntTSL 3 BASIC23.28■■□□□ 1.32
HTRA3P83110 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.28■■□□□ 1.32
HTRA3P83110 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTRA3P83110 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
HTRA3P83110 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.27■■□□□ 1.32
HTRA3P83110 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTRA3P83110 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTRA3P83110 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.27■■□□□ 1.32
HTRA3P83110 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
HTRA3P83110 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.27■■□□□ 1.32
HTRA3P83110 TSSC2-201ENST00000450217 709 ntBASIC23.27■■□□□ 1.32
HTRA3P83110 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.27■■□□□ 1.32
HTRA3P83110 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.27■■□□□ 1.32
HTRA3P83110 BX640515.1-201ENST00000617215 977 ntBASIC23.27■■□□□ 1.32
HTRA3P83110 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HTRA3P83110 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
HTRA3P83110 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTRA3P83110 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTRA3P83110 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.27■■□□□ 1.32
HTRA3P83110 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTRA3P83110 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTRA3P83110 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTRA3P83110 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTRA3P83110 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.26■■□□□ 1.31
HTRA3P83110 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
HTRA3P83110 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms