Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 C2orf69P4-201ENST00000565394 541 ntBASIC20.52■□□□□ 0.88
EIF3EP60228 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3EP60228 AC080038.1-201ENST00000611274 1154 ntBASIC20.52■□□□□ 0.88
EIF3EP60228 IKBKGP1-201ENST00000612193 1073 ntBASIC20.52■□□□□ 0.88
EIF3EP60228 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.52■□□□□ 0.88
EIF3EP60228 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
EIF3EP60228 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.52■□□□□ 0.88
EIF3EP60228 AC116562.4-201ENST00000641316 2276 ntBASIC20.52■□□□□ 0.88
EIF3EP60228 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
EIF3EP60228 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
EIF3EP60228 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
EIF3EP60228 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.51■□□□□ 0.87
EIF3EP60228 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.51■□□□□ 0.87
EIF3EP60228 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.51■□□□□ 0.87
EIF3EP60228 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.51■□□□□ 0.87
EIF3EP60228 HLA-G-202ENST00000376815 851 ntBASIC20.51■□□□□ 0.87
EIF3EP60228 HLA-G-203ENST00000376818 1127 ntBASIC20.51■□□□□ 0.87
EIF3EP60228 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
EIF3EP60228 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.51■□□□□ 0.87
EIF3EP60228 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.51■□□□□ 0.87
EIF3EP60228 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.51■□□□□ 0.87
EIF3EP60228 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EIF3EP60228 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3EP60228 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
EIF3EP60228 AC009237.14-201ENST00000609975 1594 ntBASIC20.51■□□□□ 0.87
EIF3EP60228 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
EIF3EP60228 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
EIF3EP60228 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EIF3EP60228 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.5■□□□□ 0.87
EIF3EP60228 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.5■□□□□ 0.87
EIF3EP60228 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.5■□□□□ 0.87
EIF3EP60228 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
EIF3EP60228 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.5■□□□□ 0.87
EIF3EP60228 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.5■□□□□ 0.87
EIF3EP60228 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.5■□□□□ 0.87
EIF3EP60228 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.5■□□□□ 0.87
EIF3EP60228 AC073111.5-205ENST00000641717 521 ntBASIC20.5■□□□□ 0.87
EIF3EP60228 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
EIF3EP60228 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
EIF3EP60228 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3EP60228 TREX1-205ENST00000625293 1783 ntBASIC20.49■□□□□ 0.87
EIF3EP60228 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3EP60228 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3EP60228 RNF165-205ENST00000588679 2904 ntBASIC20.49■□□□□ 0.87
EIF3EP60228 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3EP60228 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3EP60228 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.49■□□□□ 0.87
EIF3EP60228 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.49■□□□□ 0.87
EIF3EP60228 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.49■□□□□ 0.87
EIF3EP60228 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3EP60228 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3EP60228 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3EP60228 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.49■□□□□ 0.87
EIF3EP60228 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3EP60228 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.48■□□□□ 0.87
EIF3EP60228 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.48■□□□□ 0.87
EIF3EP60228 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.48■□□□□ 0.87
EIF3EP60228 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.48■□□□□ 0.87
EIF3EP60228 AC133552.2-202ENST00000575694 574 ntBASIC20.48■□□□□ 0.87
EIF3EP60228 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.48■□□□□ 0.87
EIF3EP60228 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
EIF3EP60228 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.48■□□□□ 0.87
EIF3EP60228 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.48■□□□□ 0.87
EIF3EP60228 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms