Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TMEM191A-211ENST00000637163 1067 ntBASIC21.95■■□□□ 1.1
PEX3P56589 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PEX3P56589 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PEX3P56589 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PEX3P56589 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.95■■□□□ 1.1
PEX3P56589 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
PEX3P56589 AC112907.3-201ENST00000577781 2400 ntBASIC21.95■■□□□ 1.1
PEX3P56589 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
PEX3P56589 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PEX3P56589 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PEX3P56589 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PEX3P56589 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PEX3P56589 PRORSD1P-201ENST00000295112 541 ntBASIC21.94■■□□□ 1.1
PEX3P56589 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PEX3P56589 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.94■■□□□ 1.1
PEX3P56589 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
PEX3P56589 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PEX3P56589 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.94■■□□□ 1.1
PEX3P56589 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.94■■□□□ 1.1
PEX3P56589 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PEX3P56589 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.94■■□□□ 1.1
PEX3P56589 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.94■■□□□ 1.1
PEX3P56589 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PEX3P56589 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PEX3P56589 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.94■■□□□ 1.1
PEX3P56589 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PEX3P56589 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PEX3P56589 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.94■■□□□ 1.1
PEX3P56589 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
PEX3P56589 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.93■■□□□ 1.1
PEX3P56589 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.93■■□□□ 1.1
PEX3P56589 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.93■■□□□ 1.1
PEX3P56589 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.93■■□□□ 1.1
PEX3P56589 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 AL691432.2-201ENST00000607222 2038 ntBASIC21.93■■□□□ 1.1
PEX3P56589 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.93■■□□□ 1.1
PEX3P56589 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.93■■□□□ 1.1
PEX3P56589 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PEX3P56589 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PEX3P56589 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX3P56589 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PEX3P56589 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PEX3P56589 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PEX3P56589 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PEX3P56589 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PEX3P56589 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.92■■□□□ 1.1
PEX3P56589 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.92■■□□□ 1.1
PEX3P56589 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.92■■□□□ 1.1
PEX3P56589 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.92■■□□□ 1.1
PEX3P56589 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PEX3P56589 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.92■■□□□ 1.1
PEX3P56589 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PEX3P56589 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PEX3P56589 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.91■■□□□ 1.1
PEX3P56589 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.91■■□□□ 1.1
PEX3P56589 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.91■■□□□ 1.1
PEX3P56589 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.91■■□□□ 1.1
PEX3P56589 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PEX3P56589 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
PEX3P56589 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.91■■□□□ 1.1
PEX3P56589 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PEX3P56589 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.91■■□□□ 1.1
PEX3P56589 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.91■■□□□ 1.1
PEX3P56589 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX3P56589 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PEX3P56589 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PEX3P56589 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX3P56589 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX3P56589 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX3P56589 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX3P56589 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX3P56589 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX3P56589 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PEX3P56589 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX3P56589 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.9■■□□□ 1.1
PEX3P56589 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.9■■□□□ 1.1
PEX3P56589 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms