Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH4P55283 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.36■□□□□ 0.85
CDH4P55283 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH4P55283 AL158047.1-201ENST00000445918 881 ntBASIC20.36■□□□□ 0.85
CDH4P55283 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH4P55283 AC133681.1-201ENST00000465482 601 ntBASIC20.36■□□□□ 0.85
CDH4P55283 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
CDH4P55283 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH4P55283 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.36■□□□□ 0.85
CDH4P55283 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.36■□□□□ 0.85
CDH4P55283 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH4P55283 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH4P55283 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDH4P55283 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDH4P55283 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH4P55283 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CDH4P55283 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH4P55283 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDH4P55283 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
CDH4P55283 LINC01521-201ENST00000504184 1943 ntBASIC20.35■□□□□ 0.85
CDH4P55283 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.35■□□□□ 0.85
CDH4P55283 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH4P55283 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH4P55283 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.35■□□□□ 0.85
CDH4P55283 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 AC124016.1-201ENST00000609552 612 ntBASIC20.35■□□□□ 0.85
CDH4P55283 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CDH4P55283 FAM197Y4-202ENST00000622692 608 ntBASIC20.35■□□□□ 0.85
CDH4P55283 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CDH4P55283 AC018553.1-201ENST00000616682 1458 ntBASIC20.35■□□□□ 0.85
CDH4P55283 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.35■□□□□ 0.85
CDH4P55283 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH4P55283 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH4P55283 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH4P55283 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH4P55283 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH4P55283 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH4P55283 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH4P55283 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH4P55283 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH4P55283 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH4P55283 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.34■□□□□ 0.85
CDH4P55283 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.34■□□□□ 0.85
CDH4P55283 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDH4P55283 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH4P55283 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH4P55283 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH4P55283 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH4P55283 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDH4P55283 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH4P55283 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH4P55283 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH4P55283 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
CDH4P55283 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH4P55283 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH4P55283 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CDH4P55283 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH4P55283 KRASP1-201ENST00000407852 552 ntBASIC20.33■□□□□ 0.85
CDH4P55283 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.33■□□□□ 0.85
CDH4P55283 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.33■□□□□ 0.85
CDH4P55283 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDH4P55283 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CDH4P55283 AC110285.5-201ENST00000611501 352 ntBASIC20.33■□□□□ 0.85
CDH4P55283 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.33■□□□□ 0.85
CDH4P55283 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH4P55283 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH4P55283 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH4P55283 TFP1-202ENST00000475455 1573 ntBASIC20.33■□□□□ 0.84
CDH4P55283 AC099778.1-201ENST00000568593 1911 ntBASIC20.33■□□□□ 0.84
CDH4P55283 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.33■□□□□ 0.84
CDH4P55283 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.33■□□□□ 0.84
CDH4P55283 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.33■□□□□ 0.84
CDH4P55283 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH4P55283 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.33■□□□□ 0.84
CDH4P55283 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.33■□□□□ 0.84
CDH4P55283 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH4P55283 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH4P55283 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH4P55283 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms