Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.46■□□□□ 0.39
CX3CR1P49238 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.46■□□□□ 0.39
CX3CR1P49238 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CX3CR1P49238 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CX3CR1P49238 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CR1P49238 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CX3CR1P49238 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CX3CR1P49238 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.46■□□□□ 0.39
CX3CR1P49238 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
CX3CR1P49238 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CX3CR1P49238 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.46■□□□□ 0.38
CX3CR1P49238 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CX3CR1P49238 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CR1P49238 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CX3CR1P49238 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CR1P49238 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
CX3CR1P49238 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CR1P49238 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.45■□□□□ 0.38
CX3CR1P49238 AC005181.1-201ENST00000604782 1256 ntBASIC17.45■□□□□ 0.38
CX3CR1P49238 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.45■□□□□ 0.38
CX3CR1P49238 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CR1P49238 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CX3CR1P49238 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CR1P49238 KRT8P17-201ENST00000453110 1448 ntBASIC17.45■□□□□ 0.38
CX3CR1P49238 AC010980.2-201ENST00000587099 1412 ntBASIC17.45■□□□□ 0.38
CX3CR1P49238 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.45■□□□□ 0.38
CX3CR1P49238 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CR1P49238 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CR1P49238 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CR1P49238 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CR1P49238 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CX3CR1P49238 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CX3CR1P49238 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 AC004911.1-201ENST00000416316 871 ntBASIC17.44■□□□□ 0.38
CX3CR1P49238 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CX3CR1P49238 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.44■□□□□ 0.38
CX3CR1P49238 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CR1P49238 AL589743.5-201ENST00000616611 1050 ntBASIC17.44■□□□□ 0.38
CX3CR1P49238 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CX3CR1P49238 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CX3CR1P49238 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CX3CR1P49238 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.44■□□□□ 0.38
CX3CR1P49238 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CR1P49238 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CR1P49238 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CR1P49238 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.43■□□□□ 0.38
CX3CR1P49238 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.43■□□□□ 0.38
CX3CR1P49238 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CX3CR1P49238 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.43■□□□□ 0.38
CX3CR1P49238 AL031963.3-201ENST00000606441 850 ntBASIC17.43■□□□□ 0.38
CX3CR1P49238 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.43■□□□□ 0.38
CX3CR1P49238 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.43■□□□□ 0.38
CX3CR1P49238 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.43■□□□□ 0.38
CX3CR1P49238 AC125437.2-201ENST00000625180 2167 ntBASIC17.43■□□□□ 0.38
CX3CR1P49238 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CX3CR1P49238 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CR1P49238 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CX3CR1P49238 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CX3CR1P49238 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.42■□□□□ 0.38
CX3CR1P49238 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CR1P49238 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms